The cry of 'racism' is the cry of those unable to argue with fact. It's use, more often than not, is to destroy any discussion on a topic.
The simple fact is that India has a problem with fake licences, university degrees etc. That is not racist but simple fact.
Should companies still hire Indian pilots? Of course they should but I suspect they will simply look more closely at the candidate! For those Indians on this forum crying racism, if you are qualified then there will be no issue.