It would appear so long as you haven't sat any ATPL exams or started an integrated course you can apply? But I would advise contacting the FTO for clarification.
EZY_FR, it's difficult to find extra time during a AeroEng course but my advice would be try to fit in some extra curricular activities - there are many clubs to choose from at Uni. It doesn't have to be flying related but helps if it is I guess. Not just for your application, Uni is more than just about developing academically - think you will look back and regret it if you don't. Try to think what skills are needed to be an Airline Pilot and what you can do to help develop those skills. Recommend at least a trial flying lesson - always amazed at how many people apply to be an airline pilot having never sat at the controls of an aircraft!