Thanks ausdoc for clarifying the numbers present - post edited.
Having been at the conference, you will no doubt be aware of how deeply passionate Dr Pape is about this issue. As a result of his dedication and persistance to make a difference back in the late 1980's with the successful AAT challenges, there would now be thousands of Australian colour defective pilots who have gone on to have fulfilling careers. I've never heard of any of those having had an accident or incident as a result of a colour vision deficiency.
I believe he is simply trying to tidy up the last loose ends of the campaign and the pilots he describes in his presentation are a perfect example of how CVD's demonstrate that they can operate safely and professionally, despite their inability to pass colour vision tests. Three pilots with over 17,000 hours of combined experience with impeccable safety records, on complex aircraft types (including EFIS equipped) must surely be testament to this.
I disagree with your statement that the main function of the test is not the naming of colours, because that is exactly what candidates are required to demonstrate. I've done both of the tests which are mentioned in the presentation and for example with the signal gun test, if you score one light wrong it is classed as a fail. Similarly, the PAPI simulation test does not bear any resemblence to the real thing. Colour defectives will always have trouble passing any colour vision test.
I believe what needs to be more closely examined is the way pilots cognitively process information. Flying an aircraft and making appropriate decisions based upon information presented is far more complex than simply being able to identify and name a colour. If these pilots can (and have) safely demonstrated that they can perform all the requirements of their job relevant to the ATPL licences they each hold, why should they be discriminated against from exercising their licence's privileges?