Getting back to the main subject of this thread, this quote appears to come from someone close to the project, and can be found at this link, under the COMMENTS section:
http://www.thedigitalaviator.com/blog/?p=402
"I’ve heard the misalignment was caused by one of the fixtures used to hold the section, and not by the section itself, apparently it was causing a distortion and thereby the misalignment. Adjustments to the fixture resolved the problem and everything lined up. I believe the other problem is a fastener shortage and they have people running around like mad devils rounding up alternate suppliers. As you stated problems crop up as they progress, but nothing of a major concern. I have my invitation along with thousands of others, so I would assume the roll out on 7/8/7 will proceed as planned."
Seems to be sorted!